MATLAB Codes

These programs are supplied 'as is' and no warranty is provided or implied. The author assume no liability for damages, direct or consequential that may result from the use of these programs.

Links Software Vesper FuzME NeuroPack Digeman
 

 

  • FuzME, Fuzzy k-means with extragrades analysis

  • Sampling utilities, Latin hypercube sampling with correlation

  • Bagging PLS, Partial Least Squares combined with bootstrap aggegation (bagging) for estimating uncertainty (written in 2004, requires nway toolbox)

  • cLHS, conditioned LHS

Minasny, B., McBratney, A.B., 2006. A conditioned Latin hypercube method for sampling in the presence of ancillary information. Computers & Geosciences 32, 1378-1388.

  • Bunea FDR, calculate Bunea's variable selection for linear regression using False Discovery Rate

  • Neuro-m, neural networks for estimating parameters of a function

Minasny, B., McBratney, A.B., 2002. The neuro-m method for fitting neural network parametric pedotransfer functions. Soil Science Society of America Journal 66(2), 352-361.

Minasny, B., McBratney, A.B., Mendonça-Santos, M.L., Odeh, I.O.A., Guyon, B., 2006. Prediction and digital mapping of soil carbon storage in the Lower Namoi Valley. Australian Journal of Soil Research 44, 233-244.

  • Matérn, fitting Matérn spatial covariance function with REML

Minasny, B., McBratney, A.B., 2005. The Matérn function as a general model for the soil variogram. Geoderma 128, 192-207.

  • LUSIM, Simulation of Gaussian random fields using LU decomposition & LHS

  • BLUP, Spatial prediction with REML EBLUP

Minasny, B., McBratney, A.B., 2007. Spatial prediction of soil properties using EBLUP with a Matérn covariance function. Geoderma Special Issue Pedometrics  140, 324-336.

  • VQT, Variance quadtree

Minasny, B., McBratney, A.B., 2006.The variance quadtree algorithm: use for spatial sampling design. Computers & Geosciences 33, 383-392 .

  • Austere, one dimensional water flow, finite difference solution of Richards' equation

  • Markov1D, one dimensional Markov Chain profile simulation

  • Carbon, two compartment Carbon evolution model (in Simulink)

 

 

Links to other Matlab codes